Gm58920 Gene Detail

Summary

• Symbol
  Gm58920
• Name
  predicted gene, 58920

• Feature Type
  protein coding gene
• IDs
  MGI:7800915
• Alliance
  gene page
• Transcription Start Sites
  6 TSS

Location &
Maps

• Sequence Map
  ChrX:168699064-168710665 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  479 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7800915	protein coding gene	ChrX:168699064-168710665 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm58920
  

Sequences &
Gene Models

• All Sequences
  5
• UniProt
  1

• Ensembl
  ENSMUSG00000121571 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121571	Ensembl Gene Model | MGI Sequence Detail	11602	C57BL/6J
transcript	ENSMUST00000249242	Ensembl | MGI Sequence Detail	887	Not Applicable
polypeptide	ENSMUSP00000159622	Ensembl | MGI Sequence Detail	29	Not Applicable

Protein
Information

• UniProt
  1 Sequence

References

• Summaries
  All 2
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm58920:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr162730	ChrX:168698900-168698921 (+)	-153 bp
Tssr162731	ChrX:168699064-168699078 (+)	7 bp
Tssr162732	ChrX:168699090-168699113 (+)	38 bp
Tssr162733	ChrX:168699149-168699152 (+)	87 bp
Tssr162734	ChrX:168710070-168710099 (+)	11,021 bp
Tssr162735	ChrX:168710545-168710585 (+)	11,501 bp