Gm59918 Gene Detail

Summary

• Symbol
  Gm59918
• Name
  predicted gene, 59918

• Feature Type
  lncRNA gene
• IDs
  MGI:7802897
• Alliance
  gene page
• Transcription Start Sites
  7 TSS

Location &
Maps

• Sequence Map
  Chr13:98151283-98151531 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  95 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7802897	lncRNA gene	Chr13:98151283-98151531 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm59918
  

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00000124225 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000124225	Ensembl Gene Model | MGI Sequence Detail	249	C57BL/6J
transcript	ENSMUST00000262589	Ensembl | MGI Sequence Detail	249	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm59918:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr123618	Chr13:98152771-98152791 (-)	-1,250 bp
Tssr123617	Chr13:98152745-98152750 (-)	-1,217 bp
Tssr123616	Chr13:98152712-98152723 (-)	-1,187 bp
Tssr123615	Chr13:98152694-98152708 (-)	-1,170 bp
Tssr123614	Chr13:98152683-98152692 (-)	-1,157 bp
Tssr123613	Chr13:98152610-98152667 (-)	-1,108 bp
Tssr123612	Chr13:98151501-98151531 (-)	15 bp