Gm61318 Gene Detail

Summary

• Symbol
  Gm61318
• Name
  predicted gene, 61318

• Feature Type
  lncRNA gene
• IDs
  MGI:7805674
• Alliance
  gene page
• Transcription Start Sites
  6 TSS

Location &
Maps

• Sequence Map
  Chr16:46312016-46316699 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  162 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7805674	lncRNA gene	Chr16:46312016-46316699 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm61318
  

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00000144044 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000144044	Ensembl Gene Model | MGI Sequence Detail	4684	C57BL/6J
transcript	ENSMUST00000380844	Ensembl | MGI Sequence Detail	615	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm61318:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr141298	Chr16:46317350-46317373 (-)	-663 bp
Tssr141297	Chr16:46317318-46317349 (-)	-635 bp
Tssr141296	Chr16:46317306-46317317 (-)	-613 bp
Tssr141295	Chr16:46317232-46317246 (-)	-540 bp
Tssr141294	Chr16:46316687-46316701 (-)	5 bp
Tssr141293	Chr16:46316648-46316674 (-)	38 bp