Gm62428 Gene Detail

Summary

• Symbol
  Gm62428
• Name
  predicted gene, 62428

• Feature Type
  lncRNA gene
• IDs
  MGI:7807816
• Alliance
  gene page
• Transcription Start Sites
  5 TSS

Location &
Maps

• Sequence Map
  Chr15:59140151-59147053 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  231 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7807816	lncRNA gene	Chr15:59140151-59147053 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm62428
  

Sequences &
Gene Models

• All Sequences
  6

• Ensembl
  ENSMUSG00000129117 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000129117	Ensembl Gene Model | MGI Sequence Detail	6903	C57BL/6J
transcript	ENSMUST00000291698	Ensembl | MGI Sequence Detail	1551	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm62428:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr134435	Chr15:59147051-59147095 (-)	-20 bp
Tssr134434	Chr15:59147040-59147043 (-)	11 bp
Tssr134433	Chr15:59145145-59145149 (-)	1,906 bp
Tssr134432	Chr15:59142073-59142083 (-)	4,975 bp
Tssr134431	Chr15:59141638-59141643 (-)	5,412 bp