Gm63180 Gene Detail

Summary

• Symbol
  Gm63180
• Name
  predicted gene, 63180

• Feature Type
  lncRNA gene
• IDs
  MGI:7809308
• Alliance
  gene page
• Transcription Start Sites
  7 TSS

Location &
Maps

• Sequence Map
  Chr15:101153161-101154898 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  77 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7809308	lncRNA gene	Chr15:101153161-101154898 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm63180
  

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00000141951 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000141951	Ensembl Gene Model | MGI Sequence Detail	1738	C57BL/6J
transcript	ENSMUST00000368174	Ensembl | MGI Sequence Detail	656	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm63180:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr136540	Chr15:101156297-101156307 (-)	-1,404 bp
Tssr136539	Chr15:101154797-101154812 (-)	93 bp
Tssr136538	Chr15:101154110-101154121 (-)	782 bp
Tssr136537	Chr15:101154052-101154061 (-)	841 bp
Tssr136536	Chr15:101153930-101153939 (-)	963 bp
Tssr136535	Chr15:101153911-101153920 (-)	982 bp
Tssr136534	Chr15:101153882-101153887 (-)	1,013 bp