Gm63445 Gene Detail

Summary

• Symbol
  Gm63445
• Name
  predicted gene, 63445

• Feature Type
  lncRNA gene
• IDs
  MGI:7809830
• Alliance
  gene page
• Transcription Start Sites
  6 TSS

Location &
Maps

• Sequence Map
  Chr14:69438705-69479084 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1295 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7809830	lncRNA gene	Chr14:69438705-69479084 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm63445
  

Sequences &
Gene Models

• All Sequences
  9

• Ensembl
  ENSMUSG00000140727 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000140727	Ensembl Gene Model | MGI Sequence Detail	40380	C57BL/6J
transcript	ENSMUST00000360922	Ensembl | MGI Sequence Detail	1684	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm63445:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr129451	Chr14:69481025-69481064 (-)	-1,961 bp
Tssr129450	Chr14:69480578-69480592 (-)	-1,501 bp
Tssr129449	Chr14:69480532-69480544 (-)	-1,454 bp
Tssr129448	Chr14:69480026-69480047 (-)	-953 bp
Tssr129447	Chr14:69479881-69479893 (-)	-803 bp
Tssr129446	Chr14:69459106-69459129 (-)	19,966 bp