Gm63644 Gene Detail

Summary

• Symbol
  Gm63644
• Name
  predicted gene, 63644

• Feature Type
  lncRNA gene
• IDs
  MGI:7810210
• Alliance
  gene page
• Transcription Start Sites
  9 TSS

Location &
Maps

• Sequence Map
  Chr14:27029907-27074541 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1219 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7810210	lncRNA gene	Chr14:27029907-27074541 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm63644
  

Sequences &
Gene Models

• All Sequences
  5

• Ensembl
  ENSMUSG00000140251 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000140251	Ensembl Gene Model | MGI Sequence Detail	44635	C57BL/6J
transcript	ENSMUST00000358657	Ensembl | MGI Sequence Detail	488	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm63644:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr124735	Chr14:27029928-27029940 (+)	27 bp
Tssr124736	Chr14:27057599-27057611 (+)	27,698 bp
Tssr124737	Chr14:27057749-27057785 (+)	27,860 bp
Tssr124738	Chr14:27057980-27058024 (+)	28,095 bp
Tssr124739	Chr14:27059715-27059717 (+)	29,809 bp
Tssr4351	Chr14:27063727-27063738 (+)	33,826 bp
Tssr124740	Chr14:27064013-27064017 (+)	34,108 bp
Tssr124741	Chr14:27066542-27066546 (+)	36,637 bp
Tssr4352	Chr14:27070330-27070340 (+)	40,428 bp