Gm63854 Gene Detail

Summary

• Symbol
  Gm63854
• Name
  predicted gene, 63854

• Feature Type
  lncRNA gene
• IDs
  MGI:7810621
• Alliance
  gene page
• Transcription Start Sites
  7 TSS

Location &
Maps

• Sequence Map
  Chr8:85141322-85141815 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  67 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7810621	lncRNA gene	Chr8:85141322-85141815 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm63854
  

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00000127031 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000127031	Ensembl Gene Model | MGI Sequence Detail	494	C57BL/6J
transcript	ENSMUST00000279682	Ensembl | MGI Sequence Detail	494	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm63854:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr78387	Chr8:85140892-85140903 (+)	-424 bp
Tssr78388	Chr8:85140952-85140963 (+)	-364 bp
Tssr78389	Chr8:85141012-85141104 (+)	-264 bp
Tssr78390	Chr8:85141284-85141300 (+)	-30 bp
Tssr78391	Chr8:85141314-85141354 (+)	12 bp
Tssr78392	Chr8:85141369-85141380 (+)	53 bp
Tssr78393	Chr8:85141646-85141661 (+)	332 bp