Gm64188 Gene Detail

Summary

• Symbol
  Gm64188
• Name
  predicted gene, 64188

• Feature Type
  lncRNA gene
• IDs
  MGI:7811286
• Alliance
  gene page
• Transcription Start Sites
  7 TSS

Location &
Maps

• Sequence Map
  Chr8:75939852-75940272 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  116 from dbSNP Build 142

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	no annotation
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm64188
  

Sequences &
Gene Models

• All Sequences
  2

• Ensembl
  ENSMUSG00000135686 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000135686	Ensembl Gene Model | MGI Sequence Detail	421	C57BL/6J
transcript	ENSMUST00000331705	Ensembl | MGI Sequence Detail	421	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm64188:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr78082	Chr8:75939807-75939885 (+)	-6 bp
Tssr78083	Chr8:75939887-75939913 (+)	48 bp
Tssr78084	Chr8:75939916-75939925 (+)	69 bp
Tssr78085	Chr8:75939953-75939962 (+)	106 bp
Tssr78086	Chr8:75939984-75939997 (+)	139 bp
Tssr78087	Chr8:75940058-75940089 (+)	222 bp
Tssr78088	Chr8:75940110-75940120 (+)	263 bp