Gm64236 Gene Detail

Summary

• Symbol
  Gm64236
• Name
  predicted gene, 64236

• Feature Type
  lncRNA gene
• IDs
  MGI:7811382
• Alliance
  gene page
• Transcription Start Sites
  13 TSS

Location &
Maps

• Sequence Map
  Chr8:69306868-69372807 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1677 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7811382	lncRNA gene	Chr8:69306868-69372807 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm64236
  

Sequences &
Gene Models

• All Sequences
  4

• Ensembl
  ENSMUSG00000137211 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000137211	Ensembl Gene Model | MGI Sequence Detail	65940	C57BL/6J
transcript	ENSMUST00000340416	Ensembl | MGI Sequence Detail	866	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm64236:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr81510	Chr8:69359575-69359587 (-)	13,226 bp
Tssr81509	Chr8:69358413-69358435 (-)	14,383 bp
Tssr81508	Chr8:69358384-69358398 (-)	14,416 bp
Tssr81507	Chr8:69358370-69358383 (-)	14,430 bp
Tssr81506	Chr8:69358335-69358348 (-)	14,465 bp
Tssr81505	Chr8:69357778-69357806 (-)	15,015 bp
Tssr81504	Chr8:69357202-69357232 (-)	15,590 bp
Tssr81503	Chr8:69353951-69353966 (-)	18,848 bp
Tssr81502	Chr8:69353907-69353944 (-)	18,881 bp
Tssr81501	Chr8:69349315-69349377 (-)	23,461 bp
Tssr81500	Chr8:69347318-69347345 (-)	25,475 bp
Tssr81499	Chr8:69345336-69345364 (-)	27,457 bp
Tssr81498	Chr8:69340139-69340177 (-)	32,649 bp