Gm64907 Gene Detail

Summary

• Symbol
  Gm64907
• Name
  predicted gene, 64907

• Feature Type
  lncRNA gene
• IDs
  MGI:7812717
• Alliance
  gene page
• Transcription Start Sites
  5 TSS

Location &
Maps

• Sequence Map
  Chr17:45798339-45803771 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  276 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7812717	lncRNA gene	Chr17:45798339-45803771 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm64907
  

Sequences &
Gene Models

• All Sequences
  5

• Ensembl
  ENSMUSG00000127542 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000127542	Ensembl Gene Model | MGI Sequence Detail	5433	C57BL/6J
transcript	ENSMUST00000282859	Ensembl | MGI Sequence Detail	1314	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm64907:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr144777	Chr17:45798313-45798324 (+)	-20 bp
Tssr5127	Chr17:45798326-45798331 (+)	-10 bp
Tssr144778	Chr17:45798333-45798348 (+)	2 bp
Tssr144779	Chr17:45798361-45798372 (+)	28 bp
Tssr144780	Chr17:45798378-45798389 (+)	45 bp