Gm65094 Gene Detail

Summary

• Symbol
  Gm65094
• Name
  predicted gene, 65094

• Feature Type
  lncRNA gene
• IDs
  MGI:7813088
• Alliance
  gene page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr17:46863515-46873527 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  312 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7813088	lncRNA gene	Chr17:46863515-46873527 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm65094
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  4
• Gene trapped
  4
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00000129568 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000129568	Ensembl Gene Model | MGI Sequence Detail	10013	C57BL/6J
transcript	ENSMUST00000294538	Ensembl | MGI Sequence Detail	385	Not Applicable

References

• Summaries
  All 4

  Phenotypes 3
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
• Latest
  J:152068 Friedel RH, et al., EUCOMM--the European conditional mouse mutagenesis program. Brief Funct Genomic Proteomic. 2007 Sep;6(3):180-5

TSS for Gm65094:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr5134	Chr17:46866124-46866153 (+)	2,624 bp
Tssr144859	Chr17:46866168-46866182 (+)	2,660 bp
Tssr144860	Chr17:46867347-46867355 (+)	3,836 bp