Gm65639 Gene Detail

Summary

• Symbol
  Gm65639
• Name
  predicted gene, 65639

• Feature Type
  lncRNA gene
• IDs
  MGI:7814164
• Alliance
  gene page
• Transcription Start Sites
  7 TSS

Location &
Maps

• Sequence Map
  Chr17:74480527-74480892 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  107 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7814164	lncRNA gene	Chr17:74480527-74480892 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm65639
  

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00000137981 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000137981	Ensembl Gene Model | MGI Sequence Detail	366	C57BL/6J
transcript	ENSMUST00000344789	Ensembl | MGI Sequence Detail	366	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm65639:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr149353	Chr17:74480931-74480938 (-)	-43 bp
Tssr149352	Chr17:74480913-74480923 (-)	-26 bp
Tssr149351	Chr17:74480900-74480910 (-)	-13 bp
Tssr149350	Chr17:74480875-74480897 (-)	6 bp
Tssr149349	Chr17:74480846-74480857 (-)	40 bp
Tssr149348	Chr17:74480823-74480830 (-)	65 bp
Tssr149347	Chr17:74480756-74480769 (-)	129 bp