Gm65988 Gene Detail

Summary

• Symbol
  Gm65988
• Name
  predicted gene, 65988

• Feature Type
  protein coding gene
• IDs
  MGI:7814855
• Alliance
  gene page
• Transcription Start Sites
  9 TSS

Location &
Maps

• Sequence Map
  Chr6:136148556-136149437 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  72 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7814855	protein coding gene	Chr6:136148556-136149437 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm65988
  

Sequences &
Gene Models

• All Sequences
  8
• UniProt
  2

• Ensembl
  ENSMUSG00000121908 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121908	Ensembl Gene Model | MGI Sequence Detail	882	C57BL/6J
transcript	ENSMUST00000249850	Ensembl | MGI Sequence Detail	469	Not Applicable
polypeptide	ENSMUSP00000159948	Ensembl | MGI Sequence Detail	37	Not Applicable

Protein
Information

• UniProt
  2 Sequences

References

• Summaries
  All 2
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm65988:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr63790	Chr6:136149918-136149921 (-)	-483 bp
Tssr63789	Chr6:136149429-136149434 (-)	5 bp
Tssr63788	Chr6:136149401-136149413 (-)	30 bp
Tssr63787	Chr6:136149374-136149394 (-)	53 bp
Tssr63786	Chr6:136149328-136149331 (-)	107 bp
Tssr63785	Chr6:136149310-136149321 (-)	121 bp
Tssr63784	Chr6:136149177-136149243 (-)	227 bp
Tssr63783	Chr6:136149154-136149174 (-)	273 bp
Tssr63782	Chr6:136148821-136148847 (-)	603 bp