Gm66883 Gene Detail

Summary

• Symbol
  Gm66883
• Name
  predicted gene, 66883

• Feature Type
  lncRNA gene
• IDs
  MGI:7816613
• Alliance
  gene page
• Transcription Start Sites
  7 TSS

Location &
Maps

• Sequence Map
  Chr10:7012661-7014274 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  207 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7816613	lncRNA gene	Chr10:7012661-7014274 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm66883
  

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00000131665 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000131665	Ensembl Gene Model | MGI Sequence Detail	1614	C57BL/6J
transcript	ENSMUST00000307073	Ensembl | MGI Sequence Detail	1614	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm66883:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr96587	Chr10:7014275-7014280 (-)	-4 bp
Tssr96586	Chr10:7014251-7014266 (-)	15 bp
Tssr96585	Chr10:7014231-7014243 (-)	37 bp
Tssr96584	Chr10:7014190-7014201 (-)	78 bp
Tssr3126	Chr10:7013165-7013169 (-)	1,107 bp
Tssr3125	Chr10:7013130-7013141 (-)	1,138 bp
Tssr96583	Chr10:7013100-7013109 (-)	1,169 bp