Gm66890 Gene Detail

Summary

• Symbol
  Gm66890
• Name
  predicted gene, 66890

• Feature Type
  lncRNA gene
• IDs
  MGI:7816627
• Alliance
  gene page
• Transcription Start Sites
  5 TSS

Location &
Maps

• Sequence Map
  Chr10:13840364-13841401 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  85 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7816627	lncRNA gene	Chr10:13840364-13841401 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm66890
  

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00000131764 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000131764	Ensembl Gene Model | MGI Sequence Detail	1038	C57BL/6J
transcript	ENSMUST00000307874	Ensembl | MGI Sequence Detail	1038	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm66890:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr92402	Chr10:13840370-13840391 (+)	17 bp
Tssr92403	Chr10:13840540-13840558 (+)	185 bp
Tssr92404	Chr10:13840571-13840591 (+)	217 bp
Tssr92405	Chr10:13840593-13840619 (+)	242 bp
Tssr92406	Chr10:13840758-13840787 (+)	409 bp