Gm67249 Gene Detail

Summary

• Symbol
  Gm67249
• Name
  predicted gene, 67249

• Feature Type
  lncRNA gene
• IDs
  MGI:7817338
• Alliance
  gene page
• Transcription Start Sites
  5 TSS

Location &
Maps

• Sequence Map
  Chr6:64961844-65004724 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1400 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7817338	lncRNA gene	Chr6:64961844-65004724 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm67249
  

Sequences &
Gene Models

• All Sequences
  4

• Ensembl
  ENSMUSG00000133202 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000133202	Ensembl Gene Model | MGI Sequence Detail	42881	C57BL/6J
transcript	ENSMUST00000316577	Ensembl | MGI Sequence Detail	1124	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

TSS for Gm67249:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr61209	Chr6:65001729-65001743 (-)	2,988 bp
Tssr61208	Chr6:65001688-65001709 (-)	3,025 bp
Tssr61207	Chr6:64999726-64999737 (-)	4,992 bp
Tssr61206	Chr6:64999353-64999358 (-)	5,368 bp
Tssr61205	Chr6:64998905-64998919 (-)	5,812 bp