Gm67626 Gene Detail

Summary

• Symbol
  Gm67626
• Name
  predicted gene, 67626

• Feature Type
  lncRNA gene
• IDs
  MGI:7818085
• Alliance
  gene page
• Transcription Start Sites
  7 TSS

Location &
Maps

• Sequence Map
  Chr9:96646385-96670009 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1080 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7818085	lncRNA gene	Chr9:96646385-96670009 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm67626
  

Sequences &
Gene Models

• All Sequences
  5

• Ensembl
  ENSMUSG00000123225 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000123225	Ensembl Gene Model | MGI Sequence Detail	23625	C57BL/6J
transcript	ENSMUST00000257054	Ensembl | MGI Sequence Detail	780	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm67626:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr91004	Chr9:96669967-96670008 (-)	21 bp
Tssr91003	Chr9:96669934-96669965 (-)	59 bp
Tssr91002	Chr9:96669918-96669933 (-)	83 bp
Tssr91001	Chr9:96669896-96669903 (-)	109 bp
Tssr91000	Chr9:96669809-96669816 (-)	196 bp
Tssr90999	Chr9:96669795-96669806 (-)	208 bp
Tssr90998	Chr9:96648912-96648951 (-)	21,077 bp