Gm69065 Gene Detail

Summary

• Symbol
  Gm69065
• Name
  predicted gene, 69065

• Feature Type
  lncRNA gene
• IDs
  MGI:7820947
• Alliance
  gene page
• Transcription Start Sites
  10 TSS

Location &
Maps

• Sequence Map
  Chr9:32812992-32881086 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  2201 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7820947	lncRNA gene	Chr9:32812992-32881086 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm69065
  

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00000135834 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000135834	Ensembl Gene Model | MGI Sequence Detail	68095	C57BL/6J
transcript	ENSMUST00000332516	Ensembl | MGI Sequence Detail	1008	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm69065:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr84304	Chr9:32817853-32817864 (+)	4,867 bp
Tssr84305	Chr9:32817885-32817894 (+)	4,898 bp
Tssr84306	Chr9:32822218-32822229 (+)	9,232 bp
Tssr84307	Chr9:32824355-32824362 (+)	11,367 bp
Tssr84308	Chr9:32827267-32827299 (+)	14,291 bp
Tssr84309	Chr9:32837696-32837716 (+)	24,714 bp
Tssr84310	Chr9:32837807-32837821 (+)	24,822 bp
Tssr84311	Chr9:32837901-32837916 (+)	24,917 bp
Tssr84312	Chr9:32840010-32840016 (+)	27,021 bp
Tssr84313	Chr9:32874349-32874375 (+)	61,370 bp