Gm69235 Gene Detail

Summary

• Symbol
  Gm69235
• Name
  predicted gene, 69235

• Feature Type
  lncRNA gene
• IDs
  MGI:7821287
• Alliance
  gene page
• Transcription Start Sites
  7 TSS

Location &
Maps

• Sequence Map
  Chr4:48043418-48044228 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  46 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7821287	lncRNA gene	Chr4:48043418-48044228 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm69235
  

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00000133367 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000133367	Ensembl Gene Model | MGI Sequence Detail	811	C57BL/6J
transcript	ENSMUST00000317398	Ensembl | MGI Sequence Detail	811	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm69235:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr37180	Chr4:48043001-48043023 (+)	-406 bp
Tssr37181	Chr4:48043515-48043541 (+)	110 bp
Tssr37182	Chr4:48043545-48043572 (+)	141 bp
Tssr37183	Chr4:48043640-48043652 (+)	228 bp
Tssr37184	Chr4:48043658-48043677 (+)	250 bp
Tssr37185	Chr4:48043840-48043849 (+)	427 bp
Tssr37186	Chr4:48043855-48043864 (+)	442 bp