Gm69325 Gene Detail

Summary

• Symbol
  Gm69325
• Name
  predicted gene, 69325

• Feature Type
  lncRNA gene
• IDs
  MGI:7821467
• Alliance
  gene page
• Transcription Start Sites
  10 TSS

Location &
Maps

• Sequence Map
  Chr4:102429569-102429893 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  86 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7821467	lncRNA gene	Chr4:102429569-102429893 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm69325
  

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00000134527 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000134527	Ensembl Gene Model | MGI Sequence Detail	325	C57BL/6J
transcript	ENSMUST00000325153	Ensembl | MGI Sequence Detail	325	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm69325:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr38043	Chr4:102427591-102427598 (+)	-1,974 bp
Tssr38044	Chr4:102427635-102427646 (+)	-1,928 bp
Tssr38045	Chr4:102427651-102427670 (+)	-1,908 bp
Tssr38046	Chr4:102427694-102427704 (+)	-1,870 bp
Tssr38047	Chr4:102427716-102427741 (+)	-1,840 bp
Tssr38048	Chr4:102427752-102427765 (+)	-1,810 bp
Tssr38049	Chr4:102427783-102427815 (+)	-1,770 bp
Tssr38050	Chr4:102427821-102427841 (+)	-1,738 bp
Tssr38051	Chr4:102427860-102427876 (+)	-1,701 bp
Tssr38052	Chr4:102429561-102429574 (+)	-1 bp