Gm69519 Gene Detail

Summary

• Symbol
  Gm69519
• Name
  predicted gene, 69519

• Feature Type
  lncRNA gene
• IDs
  MGI:7821853
• Alliance
  gene page
• Transcription Start Sites
  5 TSS

Location &
Maps

• Sequence Map
  Chr4:54948886-54978746 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  634 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7821853	lncRNA gene	Chr4:54948886-54978746 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm69519
  

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00000136587 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000136587	Ensembl Gene Model | MGI Sequence Detail	29861	C57BL/6J
transcript	ENSMUST00000336649	Ensembl | MGI Sequence Detail	340	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm69519:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr37315	Chr4:54947223-54947234 (+)	-1,657 bp
Tssr37316	Chr4:54947515-54947543 (+)	-1,357 bp
Tssr37317	Chr4:54947605-54947650 (+)	-1,258 bp
Tssr37318	Chr4:54947841-54947855 (+)	-1,038 bp
Tssr37319	Chr4:54947998-54948054 (+)	-860 bp