Gm69585 Gene Detail

Summary

• Symbol
  Gm69585
• Name
  predicted gene, 69585

• Feature Type
  lncRNA gene
• IDs
  MGI:7821983
• Alliance
  gene page
• Transcription Start Sites
  7 TSS

Location &
Maps

• Sequence Map
  Chr1:40430781-40452026 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  850 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7821983	lncRNA gene	Chr1:40430781-40452026 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm69585
  

Sequences &
Gene Models

• All Sequences
  9

• Ensembl
  ENSMUSG00000123590 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000123590	Ensembl Gene Model | MGI Sequence Detail	21246	C57BL/6J
transcript	ENSMUST00000259128	Ensembl | MGI Sequence Detail	1934	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm69585:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr6432	Chr1:40437742-40437771 (+)	6,976 bp
Tssr6433	Chr1:40438994-40439005 (+)	8,219 bp
Tssr6434	Chr1:40439025-40439039 (+)	8,251 bp
Tssr6435	Chr1:40444087-40444097 (+)	13,311 bp
Tssr6436	Chr1:40444099-40444110 (+)	13,324 bp
Tssr6437	Chr1:40444119-40444134 (+)	13,346 bp
Tssr6438	Chr1:40444846-40444847 (+)	14,066 bp