Gm69770 Gene Detail

Summary

• Symbol
  Gm69770
• Name
  predicted gene, 69770

• Feature Type
  lncRNA gene
• IDs
  MGI:7822351
• Alliance
  gene page
• Transcription Start Sites
  13 TSS

Location &
Maps

• Sequence Map
  Chr9:79841974-79911361 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  2244 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7822351	lncRNA gene	Chr9:79841974-79911361 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm69770
  

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00000142637 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000142637	Ensembl Gene Model | MGI Sequence Detail	69388	C57BL/6J
transcript	ENSMUST00000372252	Ensembl | MGI Sequence Detail	955	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm69770:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr90708	Chr9:79911341-79911359 (-)	11 bp
Tssr90707	Chr9:79885120-79885143 (-)	26,229 bp
Tssr90706	Chr9:79885092-79885118 (-)	26,256 bp
Tssr90705	Chr9:79885064-79885091 (-)	26,283 bp
Tssr90704	Chr9:79884966-79884984 (-)	26,386 bp
Tssr90703	Chr9:79884920-79884944 (-)	26,429 bp
Tssr90702	Chr9:79884910-79884915 (-)	26,448 bp
Tssr90701	Chr9:79884856-79884867 (-)	26,499 bp
Tssr90700	Chr9:79884822-79884831 (-)	26,534 bp
Tssr90699	Chr9:79869327-79869370 (-)	42,012 bp
Tssr90698	Chr9:79869300-79869313 (-)	42,054 bp
Tssr90697	Chr9:79869265-79869283 (-)	42,087 bp
Tssr90696	Chr9:79869243-79869258 (-)	42,110 bp