Gm70321 Gene Detail

Summary

• Symbol
  Gm70321
• Name
  predicted gene, 70321

• Feature Type
  lncRNA gene
• IDs
  MGI:7823447
• Alliance
  gene page
• Transcription Start Sites
  13 TSS

Location &
Maps

• Sequence Map
  Chr1:165603767-165604637 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  191 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7823447	lncRNA gene	Chr1:165603767-165604637 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm70321
  

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00000128999 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000128999	Ensembl Gene Model | MGI Sequence Detail	871	C57BL/6J
transcript	ENSMUST00000291088	Ensembl | MGI Sequence Detail	419	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm70321:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr9827	Chr1:165601841-165601854 (+)	-1,919 bp
Tssr9828	Chr1:165601859-165601868 (+)	-1,903 bp
Tssr9829	Chr1:165601869-165601884 (+)	-1,890 bp
Tssr9830	Chr1:165601892-165601902 (+)	-1,870 bp
Tssr9831	Chr1:165601928-165601949 (+)	-1,828 bp
Tssr9832	Chr1:165601977-165601999 (+)	-1,779 bp
Tssr9833	Chr1:165602045-165602052 (+)	-1,718 bp
Tssr9834	Chr1:165602143-165602154 (+)	-1,618 bp
Tssr9835	Chr1:165602164-165602175 (+)	-1,597 bp
Tssr9836	Chr1:165602181-165602192 (+)	-1,580 bp
Tssr9837	Chr1:165602292-165602296 (+)	-1,473 bp
Tssr9838	Chr1:165602325-165602336 (+)	-1,436 bp
Tssr9839	Chr1:165602374-165602387 (+)	-1,386 bp