Gm70636 Gene Detail

Summary

• Symbol
  Gm70636
• Name
  predicted gene, 70636

• Feature Type
  lncRNA gene
• IDs
  MGI:7824067
• Alliance
  gene page
• Transcription Start Sites
  7 TSS

Location &
Maps

• Sequence Map
  Chr1:157239922-157248638 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  238 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7824067	lncRNA gene	Chr1:157239922-157248638 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm70636
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  25
• Gene trapped
  25
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  11

• Ensembl
  ENSMUSG00000121798 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121798	Ensembl Gene Model | MGI Sequence Detail	8717	C57BL/6J
transcript	ENSMUST00000061537	Ensembl | MGI Sequence Detail	2026	Not Applicable

References

• Summaries
  All 4

  Phenotypes 3
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
• Latest
  J:137511 Lin Q, et al., Mutagenesis of diploid mammalian genes by gene entrapment. Nucleic Acids Res. 2006;34(20):e139

TSS for Gm70636:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr9583	Chr1:157239824-157239833 (+)	-93 bp
Tssr9584	Chr1:157239941-157239960 (+)	29 bp
Tssr9585	Chr1:157240219-157240234 (+)	305 bp
Tssr9586	Chr1:157240237-157240247 (+)	320 bp
Tssr9587	Chr1:157240251-157240253 (+)	330 bp
Tssr9588	Chr1:157240255-157240267 (+)	339 bp
Tssr9589	Chr1:157240271-157240344 (+)	386 bp