Gm71210 Gene Detail

Summary

• Symbol
  Gm71210
• Name
  predicted gene, 71210

• Feature Type
  lncRNA gene
• IDs
  MGI:7825201
• Alliance
  gene page
• Transcription Start Sites
  6 TSS

Location &
Maps

• Sequence Map
  Chr5:115060471-115060878 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  98 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7825201	lncRNA gene	Chr5:115060471-115060878 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm71210
  

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00000122036 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000122036	Ensembl Gene Model | MGI Sequence Detail	408	C57BL/6J
transcript	ENSMUST00000250409	Ensembl | MGI Sequence Detail	408	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm71210:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr48155	Chr5:115060166-115060193 (+)	-291 bp
Tssr48156	Chr5:115060270-115060293 (+)	-189 bp
Tssr48157	Chr5:115060301-115060335 (+)	-153 bp
Tssr48158	Chr5:115060501-115060535 (+)	47 bp
Tssr48159	Chr5:115060560-115060580 (+)	99 bp
Tssr48160	Chr5:115060600-115060624 (+)	141 bp