Gm71503 Gene Detail

Summary

• Symbol
  Gm71503
• Name
  predicted gene, 71503

• Feature Type
  lncRNA gene
• IDs
  MGI:7825779
• Alliance
  gene page
• Transcription Start Sites
  7 TSS

Location &
Maps

• Sequence Map
  Chr5:115614078-115615372 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  125 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7825779	lncRNA gene	Chr5:115614078-115615372 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm71503
  

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00000127019 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000127019	Ensembl Gene Model | MGI Sequence Detail	1295	C57BL/6J
transcript	ENSMUST00000279661	Ensembl | MGI Sequence Detail	328	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm71503:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr48284	Chr5:115612563-115612574 (+)	-1,509 bp
Tssr48285	Chr5:115612577-115612634 (+)	-1,472 bp
Tssr48286	Chr5:115612637-115612640 (+)	-1,439 bp
Tssr48287	Chr5:115612671-115612697 (+)	-1,394 bp
Tssr48288	Chr5:115612707-115612721 (+)	-1,364 bp
Tssr48289	Chr5:115612732-115612741 (+)	-1,341 bp
Tssr48290	Chr5:115614926-115614930 (+)	850 bp