Gm71766 Gene Detail

Summary

• Symbol
  Gm71766
• Name
  predicted gene, 71766

• Feature Type
  lncRNA gene
• IDs
  MGI:7826300
• Alliance
  gene page
• Transcription Start Sites
  5 TSS

Location &
Maps

• Sequence Map
  Chr5:113956836-113972387 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  492 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7826300	lncRNA gene	Chr5:113956836-113972387 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm71766
  

Sequences &
Gene Models

• All Sequences
  5

• Ensembl
  ENSMUSG00000130821 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000130821	Ensembl Gene Model | MGI Sequence Detail	15552	C57BL/6J
transcript	ENSMUST00000302137	Ensembl | MGI Sequence Detail	1070	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm71766:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr48033	Chr5:113957450-113957518 (+)	648 bp
Tssr48034	Chr5:113957605-113957691 (+)	812 bp
Tssr48035	Chr5:113965078-113965090 (+)	8,248 bp
Tssr48036	Chr5:113966434-113966447 (+)	9,605 bp
Tssr48037	Chr5:113966967-113966972 (+)	10,134 bp