Gm72933 Gene Detail

Summary

• Symbol
  Gm72933
• Name
  predicted gene, 72933

• Feature Type
  lncRNA gene
• IDs
  MGI:7828626
• Alliance
  gene page
• Transcription Start Sites
  12 TSS

Location &
Maps

• Sequence Map
  Chr11:69300580-69300723 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  45 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7828626	lncRNA gene	Chr11:69300580-69300723 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm72933
  

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00000130633 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000130633	Ensembl Gene Model | MGI Sequence Detail	144	C57BL/6J
transcript	ENSMUST00000300892	Ensembl | MGI Sequence Detail	144	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm72933:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr108682	Chr11:69302565-69302580 (-)	-1,850 bp
Tssr108681	Chr11:69302522-69302547 (-)	-1,812 bp
Tssr108680	Chr11:69302491-69302504 (-)	-1,775 bp
Tssr108679	Chr11:69301837-69301867 (-)	-1,129 bp
Tssr108678	Chr11:69301538-69301562 (-)	-827 bp
Tssr108677	Chr11:69301522-69301533 (-)	-805 bp
Tssr108676	Chr11:69301478-69301493 (-)	-763 bp
Tssr108675	Chr11:69301433-69301442 (-)	-715 bp
Tssr108674	Chr11:69301266-69301279 (-)	-550 bp
Tssr108673	Chr11:69301222-69301258 (-)	-517 bp
Tssr108672	Chr11:69301194-69301206 (-)	-477 bp
Tssr108671	Chr11:69300710-69300732 (-)	2 bp