Gm74048 Gene Detail

Summary

• Symbol
  Gm74048
• Name
  predicted gene, 74048

• Feature Type
  lncRNA gene
• IDs
  MGI:7830840
• Alliance
  gene page
• Transcription Start Sites
  7 TSS

Location &
Maps

• Sequence Map
  Chr7:115425834-115475744 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  966 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7830840	lncRNA gene	Chr7:115425834-115475744 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm74048
  

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00000143985 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000143985	Ensembl Gene Model | MGI Sequence Detail	49911	C57BL/6J
transcript	ENSMUST00000380522	Ensembl | MGI Sequence Detail	411	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm74048:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr74374	Chr7:115459082-115459099 (-)	16,653 bp
Tssr74373	Chr7:115459055-115459081 (-)	16,676 bp
Tssr74372	Chr7:115445397-115445408 (-)	30,341 bp
Tssr74371	Chr7:115445393-115445394 (-)	30,350 bp
Tssr74370	Chr7:115445353-115445389 (-)	30,373 bp
Tssr74369	Chr7:115445315-115445347 (-)	30,413 bp
Tssr74368	Chr7:115440855-115440859 (-)	34,887 bp