Gm74590 Gene Detail

Summary

• Symbol
  Gm74590
• Name
  predicted gene, 74590

• Feature Type
  lncRNA gene
• IDs
  MGI:7831910
• Alliance
  gene page
• Transcription Start Sites
  8 TSS

Location &
Maps

• Sequence Map
  Chr2:45001499-45001861 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  24 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7831910	lncRNA gene	Chr2:45001499-45001861 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm74590
  

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00000123227 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000123227	Ensembl Gene Model | MGI Sequence Detail	363	C57BL/6J
transcript	ENSMUST00000257087	Ensembl | MGI Sequence Detail	363	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm74590:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr23985	Chr2:45003267-45003287 (-)	-1,416 bp
Tssr23984	Chr2:45003229-45003250 (-)	-1,379 bp
Tssr23983	Chr2:45003213-45003226 (-)	-1,359 bp
Tssr23982	Chr2:45003004-45003022 (-)	-1,152 bp
Tssr23981	Chr2:45002127-45002146 (-)	-276 bp
Tssr23980	Chr2:45002095-45002106 (-)	-240 bp
Tssr23979	Chr2:45001850-45001874 (-)	-1 bp
Tssr23978	Chr2:45001720-45001733 (-)	134 bp