Gm75546 Gene Detail

Summary

• Symbol
  Gm75546
• Name
  predicted gene, 75546

• Feature Type
  lncRNA gene
• IDs
  MGI:7833814
• Alliance
  gene page
• Transcription Start Sites
  8 TSS

Location &
Maps

• Sequence Map
  Chr2:180036618-180096667 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1732 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7833814	lncRNA gene	Chr2:180036618-180096667 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm75546
  

Sequences &
Gene Models

• All Sequences
  68

• Ensembl
  ENSMUSG00000140314 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000140314	Ensembl Gene Model | MGI Sequence Detail	60050	C57BL/6J
transcript	ENSMUST00000358933	Ensembl | MGI Sequence Detail	1777	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm75546:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr28111	Chr2:180085679-180085726 (-)	10,964 bp
Tssr28110	Chr2:180085608-180085627 (-)	11,049 bp
Tssr28109	Chr2:180081662-180081697 (-)	14,987 bp
Tssr28108	Chr2:180081346-180081353 (-)	15,317 bp
Tssr28107	Chr2:180081315-180081321 (-)	15,349 bp
Tssr28106	Chr2:180081279-180081314 (-)	15,370 bp
Tssr28105	Chr2:180081277-180081278 (-)	15,389 bp
Tssr28104	Chr2:180071577-180071621 (-)	25,068 bp