Gm75556 Gene Detail

Summary

• Symbol
  Gm75556
• Name
  predicted gene, 75556

• Feature Type
  lncRNA gene
• IDs
  MGI:7833834
• Alliance
  gene page
• Transcription Start Sites
  10 TSS

Location &
Maps

• Sequence Map
  Chr2:22633932-22665381 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1130 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7833834	lncRNA gene	Chr2:22633932-22665381 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm75556
  

Sequences &
Gene Models

• All Sequences
  7

• Ensembl
  ENSMUSG00000140457 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000140457	Ensembl Gene Model | MGI Sequence Detail	31450	C57BL/6J
transcript	ENSMUST00000359656	Ensembl | MGI Sequence Detail	661	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm75556:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr22870	Chr2:22665277-22665291 (-)	97 bp
Tssr22869	Chr2:22651329-22651346 (-)	14,043 bp
Tssr22868	Chr2:22635305-22635339 (-)	30,059 bp
Tssr22867	Chr2:22635127-22635151 (-)	30,242 bp
Tssr22866	Chr2:22635053-22635099 (-)	30,305 bp
Tssr22865	Chr2:22634987-22635032 (-)	30,371 bp
Tssr22864	Chr2:22634914-22634944 (-)	30,452 bp
Tssr22863	Chr2:22634776-22634798 (-)	30,594 bp
Tssr22862	Chr2:22634617-22634633 (-)	30,756 bp
Tssr22861	Chr2:22634585-22634607 (-)	30,785 bp