Gm75693 Gene Detail

Summary

• Symbol
  Gm75693
• Name
  predicted gene, 75693

• Feature Type
  lncRNA gene
• IDs
  MGI:7834106
• Alliance
  gene page
• Transcription Start Sites
  10 TSS

Location &
Maps

• Sequence Map
  Chr2:173001933-173007473 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  238 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7834106	lncRNA gene	Chr2:173001933-173007473 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm75693
  

Sequences &
Gene Models

• All Sequences
  5

• Ensembl
  ENSMUSG00000142841 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000142841	Ensembl Gene Model | MGI Sequence Detail	5541	C57BL/6J
transcript	ENSMUST00000373501	Ensembl | MGI Sequence Detail	385	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm75693:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr22038	Chr2:173000152-173000168 (+)	-1,773 bp
Tssr22039	Chr2:173000202-173000224 (+)	-1,720 bp
Tssr22040	Chr2:173000277-173000288 (+)	-1,650 bp
Tssr22041	Chr2:173000447-173000460 (+)	-1,479 bp
Tssr22042	Chr2:173000532-173000543 (+)	-1,395 bp
Tssr22043	Chr2:173000565-173000574 (+)	-1,363 bp
Tssr22044	Chr2:173000617-173000630 (+)	-1,309 bp
Tssr22045	Chr2:173000663-173000681 (+)	-1,261 bp
Tssr22046	Chr2:173000812-173000836 (+)	-1,109 bp
Tssr22047	Chr2:173000993-173000998 (+)	-937 bp