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Scgb1b27 Gene Detail
Summary
  • Symbol
    Scgb1b27
  • Name
    secretoglobin, family 1B, member 27
  • Synonyms
    Abp, Abpa, Abpa27, Sal-1, Tcp
  • Feature Type
    protein coding gene
  • IDs
    MGI:87862
    NCBI Gene: 11354
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:33720908-33722306 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 19.38 cM
  • Mapping Data
    11 experiments
Strain
Comparison
more
  • SNPs within 2kb
    193 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_87862
 protein coding gene Chr7:33720906-33722306 (+)
129S1/SvImJ MGP_129S1SvImJ_G0032071
 protein coding gene Chr7:33339791-33341189 (+)
A/J no annotation
AKR/J MGP_AKRJ_G0031982
 protein coding gene Chr7:33153409-33154807 (+)
BALB/cJ MGP_BALBcJ_G0032056
 protein coding gene Chr7:32672205-32673603 (+)
C3H/HeJ MGP_C3HHeJ_G0031773
 protein coding gene Chr7:34016741-34018139 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032533
 protein coding gene Chr7:34949954-34951352 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0031108
 protein coding gene Chr7:25203011-25204409 (+)
CBA/J MGP_CBAJ_G0031741
 protein coding gene Chr7:36043167-36044565 (+)
DBA/2J MGP_DBA2J_G0031893
 protein coding gene Chr7:32250954-32252352 (+)
FVB/NJ MGP_FVBNJ_G0031848
 protein coding gene Chr7:32193199-32194597 (+)
LP/J MGP_LPJ_G0031970
 protein coding gene Chr7:33558267-33559665 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031886
 protein coding gene Chr7:35006948-35008346 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032548
 protein coding gene Chr7:32693266-32695188 (+)
PWK/PhJ MGP_PWKPhJ_G0030830
 protein coding gene Chr7:25632953-25634351 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030666
 protein coding gene Chr7:22340075-22341473 (+)
WSB/EiJ MGP_WSBEiJ_G0031218
 protein coding gene Chr7:33269894-33271292 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    711
  • Tissues
    4
  • cDNA Data
    99
  • Literature Summary
    1
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000066583 Ensembl Gene Model | MGI Sequence Detail 1399 C57BL/6J ±  kb
transcript ENSMUST00000085618 Ensembl | MGI Sequence Detail 493 Not Applicable  
polypeptide ENSMUSP00000082758 Ensembl | MGI Sequence Detail 92 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR006178 Major allergen I polypeptide chain 1
    IPR016126 Secretoglobin
    IPR053723 Secretoglobin Domain-Containing
    IPR035960 Secretoglobin superfamily
Molecular
Reagents
less
  • All nucleic 99
    cDNA 99

    Microarray probesets 3
Other
Accession IDs
less
MGD-MRK-1018, MGD-MRK-1019, MGD-MRK-14287, MGD-MRK-14809
References
more
  • Summaries
    All 46
    Developmental Gene Expression 1
    Gene Ontology 7
    Phenotypes 6
  • Earliest
    J:6851 Karn RC, et al., Sex-limited genetic variation in a mouse salivary protein. Biochem Genet. 1982 Jun;20(5-6):493-504
  • Latest
    J:267279 Chung AG, et al., Studies of an Androgen-Binding Protein Knockout Corroborate a Role for Salivary ABP in Mouse Communication. Genetics. 2017 Apr;205(4):1517-1527
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory