Aprt-ps Pseudogene Detail

Summary

• Symbol
  Aprt-ps
• Name
  adenine phosphoribosyl transferase, pseudogene

• Feature Type
  pseudogene
• IDs
  MGI:88062
  NCBI Gene: 621377
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:71676593-71677097 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 34.43 cM
• Mapping Data
  9 experiments

Strain
Comparison

• SNPs within 2kb
  81 from dbSNP Build 142
• Strain Annotations
  1
• RFLP
  9

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_88062	pseudogene	Chr8:71676559-71677097 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Aprt-ps
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Aprt-ps
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  6
• RefSeq
  1

• Ensembl
  ENSMUSG00000110664 (Evidence)
• NCBI Gene
  621377

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110664	Ensembl Gene Model | MGI Sequence Detail	505	C57BL/6J
transcript	ENSMUST00000212311	Ensembl | MGI Sequence Detail	505	Not Applicable

Molecular
Reagents

• All nucleic 17

  Genomic 14

  cDNA 2

  Other 1

Other
Accession IDs

MGD-MRK-1381

References

• Summaries
  All 15

  Phenotypes 2
• Earliest
  J:7132 Sikela JM, et al., Cloning and expression of a mouse adenine phosphoribosyltransferase gene. Gene. 1983 May-Jun;22(2-3):219-28
• Latest
  J:56269 Chen A, et al., NIMA-related kinases: isolation and characterization of murine nek3 and nek4 cDNAs, and chromosomal localization of nek1, nek2 and nek3. Gene. 1999 Jun 24;234(1):127-37