Ck-ps3 Pseudogene Detail

Summary

• Symbol
  Ck-ps3
• Name
  creatine kinase pseudogene 3

• Feature Type
  pseudogene
• IDs
  MGI:88406
  NCBI Gene: 12708
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr16:38303544-38304958 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 26.86 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  152 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_88406	pseudogene	Chr16:38303544-38304958 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Sequences &
Gene Models

• All Sequences
  4
• RefSeq
  1

• NCBI Gene
  12708

Representative Sequences			Length	Strain/Species
genomic	12708	NCBI Gene Model | MGI Sequence Detail	1415	C57BL/6J

Molecular
Reagents

• All nucleic 3

  Genomic 3

Other
Accession IDs

MGD-MRK-1996

References

• Summaries
  All 5
• Earliest
  J:455 Cho M, et al., A linkage map of distal mouse chromosome 12. Mamm Genome. 1991;1(1):30-6
• Latest
  J:2017 van Deursen J, et al., Genetic variability of the murine creatine kinase B gene locus and related pseudogenes in different inbred strains of mice. Genomics. 1992 Feb;12(2):340-9

TSS for Ck-ps3:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr138392	Chr16:38303533-38303547 (+)	-4 bp