Klk1b2-ps Pseudogene Detail

Summary

• Symbol
  Klk1b2-ps
• Name
  kallikrein 1-related peptidase b2, pseudogene
• Synonyms
  Klk-ps1, mGK-2

• Feature Type
  pseudogene
• IDs
  MGI:892029
  NCBI Gene: 16602
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:43608246-43612372 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 28.44 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  423 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_892029	pseudogene	Chr7:43608204-43612420 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0040564	pseudogene	Chr7:43159649-43163877 (+)
AKR/J	MGP_AKRJ_G0040495	pseudogene	Chr7:44534768-44538974 (+)
BALB/cJ	MGP_BALBcJ_G0040560	pseudogene	Chr7:43312991-43363330 (+)
C3H/HeJ	MGP_C3HHeJ_G0040198	pseudogene	Chr7:45038235-45042435 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0041229	pseudogene	Chr7:46256645-46262135 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0039244	pseudogene	Chr7:36273071-36275304 (+)
CBA/J	MGP_CBAJ_G0040167	pseudogene	Chr7:47935470-47939675 (+)
DBA/2J	MGP_DBA2J_G0040372	pseudogene	Chr7:42940554-42960669 (+)
FVB/NJ	MGP_FVBNJ_G0040305	pseudogene	Chr7:42622103-42670982 (+)
LP/J	MGP_LPJ_G0040408	pseudogene	Chr7:44774156-44795839 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040297	pseudogene	Chr7:46612513-46693496 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041281	pseudogene	Chr7:43611939-43617815 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0039497	pseudogene	Chr7:44202719-44205146 (+)

Homology

• Gene Tree
  Klk1b2-ps
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000108651 (Evidence)
• NCBI Gene
  16602

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108651	Ensembl Gene Model | MGI Sequence Detail	4127	C57BL/6J
transcript	ENSMUST00000206099	Ensembl | MGI Sequence Detail	786	Not Applicable

Molecular
Reagents

• All nucleic 84

  Genomic 82

  cDNA 2

References

• Summaries
  All 12
• Earliest
  J:7072 Mason AJ, et al., Structure of mouse kallikrein gene family suggests a role in specific processing of biologically active peptides. Nature. 1983 May 26;303(5915):300-7
• Latest
  J:90604 Olsson AY, et al., Taxon-specific evolution of glandular kallikrein genes and identification of a progenitor of prostate-specific antigen. Genomics. 2004 Jul;84(1):147-56

TSS for Klk1b2-ps:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr66074	Chr7:43608203-43608212 (+)	-38 bp