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H2-K2 Pseudogene Detail
Summary
  • Symbol
    H2-K2
  • Name
    histocompatibility 2, K region locus 2
  • Synonyms
    H2-K1, H-2K1, H-2K1K, H-2K2
  • Feature Type
    pseudogene
  • IDs
    MGI:95906
    NCBI Gene: 630499
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:34194050-34197764 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 17.98 cM
  • Mapping Data
    6 experiments
Strain
Comparison
more
  • SNPs within 2kb
    2 from dbSNP Build 142
  • Strain Annotations
    4
  • RFLP
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_95906
 pseudogene Chr17:34193633-34197765 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0040142
 pseudogene Chr17:32758080-32762390 (-)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0040128
 pseudogene Chr17:32930036-32934446 (-)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0040718
 pseudogene Chr17:35213116-35219768 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    14
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000067203 Ensembl Gene Model | MGI Sequence Detail 3715 C57BL/6J ±  kb
transcript ENSMUST00000174250 Ensembl | MGI Sequence Detail 1052 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 46
    Genomic 27
    cDNA 4
    Other 15

    Microarray probesets 4
Other
Accession IDs
less
MGD-MRK-10389, MGD-MRK-10390, MGD-MRK-10501, MGD-MRK-10502, MGI:3644203, MGI:95905
References
more
  • Summaries
    All 33
    Developmental Gene Expression 1
    Phenotypes 1
  • Earliest
    J:7080 Winoto A, et al., Genetic mapping in the major histocompatibility complex by restriction enzyme site polymorphisms: most mouse class I genes map to the Tla complex. Proc Natl Acad Sci U S A. 1983 Jun;80(11):3425-9
  • Latest
    J:321899 Park H, et al., Non-coding RNA Neat1 and Abhd11os expressions are dysregulated in medium spiny neurons of Huntington disease model mice. Neurosci Res. 2019 Oct;147:58-63
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory