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H2-M6-ps Pseudogene Detail
Summary
  • Symbol
    H2-M6-ps
  • Name
    histocompatibility 2, M region locus 6, pseudogene
  • Synonyms
    H2-M6, H-2M6
  • Feature Type
    pseudogene
  • IDs
    MGI:95918
    NCBI Gene: 14994
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:37280099-37282288 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 19.16 cM
  • Mapping Data
    5 experiments
Strain
Comparison
more
  • Strain Annotations
    18
  • RFLP
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_95918
 pseudogene Chr17:37280087-37282288 (-)
129S1/SvImJ MGP_129S1SvImJ_G0040186
 pseudogene Chr17:37327507-37329702 (-)
A/J MGP_AJ_G0040172
 pseudogene Chr17:36150890-36153076 (-)
AKR/J MGP_AKRJ_G0040103
 pseudogene Chr17:36583140-36585334 (-)
BALB/cJ MGP_BALBcJ_G0040164
 pseudogene Chr17:36394215-36396411 (-)
C3H/HeJ MGP_C3HHeJ_G0039809
 pseudogene Chr17:37098565-37100759 (-)
C57BL/6NJ MGP_C57BL6NJ_G0040759
 pseudogene Chr17:38921169-38923370 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0037212
 pseudogene Chr17:33964123-33966317 (-)
CAST/EiJ MGP_CASTEiJ_G0038897
 pseudogene Chr17:37230020-37232206 (-)
CBA/J MGP_CBAJ_G0039777
 pseudogene Chr17:40439962-40442156 (-)
DBA/2J MGP_DBA2J_G0039973
 pseudogene Chr17:35542115-35544309 (-)
FVB/NJ MGP_FVBNJ_G0039933
 pseudogene Chr17:35149420-35151606 (-)
LP/J MGP_LPJ_G0040014
 pseudogene Chr17:37856772-37858967 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0039924
 pseudogene Chr17:39232553-39234739 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0040855
 pseudogene Chr17:36924435-36926621 (-)
PWK/PhJ MGP_PWKPhJ_G0038588
 pseudogene Chr17:34320121-34322314 (-)
SPRET/EiJ MGP_SPRETEiJ_G0038288
 pseudogene Chr17:35010996-35013196 (-)
WSB/EiJ MGP_WSBEiJ_G0039118
 pseudogene Chr17:37245922-37248109 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    35
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 14994 NCBI Gene Model | MGI Sequence Detail 2190 C57BL/6J ±  kb
For the selected sequence
Molecular
Reagents
less
  • All nucleic 7
    Genomic 5
    Other 2
Other
Accession IDs
less
MGD-MRK-10403, MGD-MRK-10514
References
more
  • Summaries
    All 17
    Phenotypes 5
  • Earliest
    J:13181 Wang CR, et al., Organization and structure of the H-2M4-M8 class I genes in the mouse major histocompatibility complex. Immunogenetics. 1993;38(4):258-71
  • Latest
    J:190754 Ermakova O, et al., Construction and phenotypic analysis of mice carrying a duplication of the major histocompatibility class I (MHC-I) locus. Mamm Genome. 2012 Aug;23(7-8):443-53
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory