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Prkcb Gene Detail
Summary
  • Symbol
    Prkcb
  • Name
    protein kinase C, beta
  • Synonyms
    A130082F03Rik, Pkcb, PKC-Beta, Prkcb1, Prkcb2
  • Feature Type
    protein coding gene
  • IDs
    MGI:97596
    NCBI Gene: 18751
  • Alliance
    gene page
  • Transcription Start Sites
    27 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:121888327-122233625 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 65.75 cM
  • Mapping Data
    11 experiments
Strain
Comparison
more
  • SNPs within 2kb
    9199 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
    3
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_97596
 protein coding gene Chr7:121887974-122233625 (+)
129S1/SvImJ MGP_129S1SvImJ_G0032956
 protein coding gene Chr7:126373425-126733715 (+)
A/J MGP_AJ_G0032939
 protein coding gene Chr7:123095855-123445286 (+)
AKR/J MGP_AKRJ_G0032871
 protein coding gene Chr7:126231000-126587935 (+)
BALB/cJ MGP_BALBcJ_G0032944
 protein coding gene Chr7:122786087-123131349 (+)
C3H/HeJ MGP_C3HHeJ_G0032654
 protein coding gene Chr7:126147729-126497194 (+)
C57BL/6NJ MGP_C57BL6NJ_G0033450
 protein coding gene Chr7:131351059-131716176 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030422
 protein coding gene Chr7:124421774-124757700 (+)
CAST/EiJ MGP_CASTEiJ_G0031982
 protein coding gene Chr7:117930724-118298205 (+)
CBA/J MGP_CBAJ_G0032627
 protein coding gene Chr7:135780492-136145249 (+)
DBA/2J MGP_DBA2J_G0032779
 protein coding gene Chr7:121092421-121439359 (+)
FVB/NJ MGP_FVBNJ_G0032732
 protein coding gene Chr7:120948450-121294461 (+)
LP/J MGP_LPJ_G0032873
 protein coding gene Chr7:127811409-128169610 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0032764
 protein coding gene Chr7:137134103-137498300 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0033470
 protein coding gene Chr7:125232502-125587513 (+)
PWK/PhJ MGP_PWKPhJ_G0031690
 protein coding gene Chr7:114028753-114375673 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031536
 protein coding gene Chr7:112003833-112359915 (+)
WSB/EiJ MGP_WSBEiJ_G0032095
 protein coding gene Chr7:126133880-126500871 (+)



Homology
more
  • Human Ortholog
    PRKCB, protein kinase C beta
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PRKCB, protein kinase C beta
  • Synonyms
    PKCB, PKC-beta, PKCbeta, PKCI(2), PRKCB1, PRKCB2
  • Links
    NCBI Gene ID: 5579
    neXtProt AC: NX_P05771
    UniProt: P05771

  • Chr Location
    16p12.2-p12.1; chr16:23835983-24220611 (+)  GRCh38
Human Diseases
more
  • Diseases
    2 with human PRKCB associations

Human Disease Mouse Models
      
IDs
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    18 phenotypes from 8 alleles in 13 genetic backgrounds
    67 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a null allele exhibit impaired humoral immune responses, altered proliferative responses of B cells to various stimuli, abnormal vascular wound healing, and deficits in contextual and cued fear conditioning. ENU-induced mutations leadto impaired T cell-independent IgM responses.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    88
  • GO References
    28
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    859
  • Tissues
    89
  • cDNA Data
    11
  • Literature Summary
    29
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 18751 NCBI Gene Model | MGI Sequence Detail 345299 C57BL/6J ±  kb
    transcript NM_008855 RefSeq | MGI Sequence Detail 8830 ZRU/MplStud  
    polypeptide P68404 UniProt | EBI | MGI Sequence Detail 671 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 17
      Genomic 1
      cDNA 14
      Primer pair 1
      Other 1

      Microarray probesets 6
    Other
    Accession IDs
    less
    MGD-MRK-13328, MGI:2442598
    References
    more
    • Summaries
      All 203
      Developmental Gene Expression 29
      Gene Ontology 28
      Phenotypes 67
    • Earliest
      J:10128 Wada H, et al., Cell type-specific expression of the genes for the protein kinase C family: down regulation of mRNAs for PKC alpha and nPKC epsilon upon in vitro differentiation of a mouse neuroblastoma cell line neuro 2a. Biochem Biophys Res Commun. 1989 Nov 30;165(1):533-8
    • Latest
      J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    12/10/2024
    MGI 6.24     		The Jackson Laboratory