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Rnu6 Gene Detail
Summary
  • Symbol
    Rnu6
  • Name
    U6 small nuclear RNA
  • Feature Type
    snRNA gene
  • IDs
    MGI:97989
    NCBI Gene: 19862
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr17:13652295-13652401 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 8.88 cM
Strain
Comparison
more
  • SNPs within 2kb
    22 from dbSNP Build 142
  • Strain Annotations
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_97989
 snRNA gene Chr17:13652295-13652401 (-)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    11
  • Tissues
    11
  • cDNA Data
    1
  • Literature Summary
    14
  • Other Mouse Links
    GEO
Sequences &
Gene Models
less
  • All Sequences
    7
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 19862 NCBI Gene Model | MGI Sequence Detail 107 C57BL/6J ±  kb
transcript NR_003027 RefSeq | MGI Sequence Detail 107 ZRU/MplStud  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 9
    Genomic 2
    cDNA 1
    Primer pair 1
    Other 5
Other
Accession IDs
less
MGD-MRK-13997
References
more
  • Summaries
    All 24
    Developmental Gene Expression 14
    Gene Ontology 1
  • Earliest
    J:6656 Ohshima Y, et al., Nucleotide sequences of mouse genomic loci including a gene or pseudogene for U6 (4.8S) nuclear RNA. Nucleic Acids Res. 1981 Oct 10;9(19):5145-58
  • Latest
    J:347865 Chen KQ, et al., Sall genes regulate hindlimb initiation in mouse embryos. Genetics. 2024 Feb 22;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory