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Scp2-ps1 Pseudogene Detail
Summary
  • Symbol
    Scp2-ps1
  • Name
    sterol carrier protein 2, pseudogene 1
  • Feature Type
    pseudogene
  • IDs
    MGI:98255
    NCBI Gene: 20281
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:155220078-155220948 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 80.04 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    160 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_98255
 pseudogene Chr3:155220059-155221304 (+)
129S1/SvImJ MGP_129S1SvImJ_G0040344
 pseudogene Chr3:159569386-159570256 (+)
A/J MGP_AJ_G0040317
 pseudogene Chr3:153748834-153749704 (+)
AKR/J MGP_AKRJ_G0040254
 pseudogene Chr3:157835299-157837475 (+)
BALB/cJ MGP_BALBcJ_G0040317
 pseudogene Chr3:153546718-153547588 (+)
C3H/HeJ MGP_C3HHeJ_G0039946
 pseudogene Chr3:158225534-158226404 (+)
C57BL/6NJ MGP_C57BL6NJ_G0040919
 pseudogene Chr3:164745415-164746285 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0037330
 pseudogene Chr3:148459375-148459871 (+)
CAST/EiJ MGP_CASTEiJ_G0039026
 pseudogene Chr3:158360257-158361105 (+)
CBA/J MGP_CBAJ_G0039910
 pseudogene Chr3:170666013-170666883 (+)
DBA/2J MGP_DBA2J_G0040118
 pseudogene Chr3:152808466-152809336 (+)
FVB/NJ MGP_FVBNJ_G0040073
 pseudogene Chr3:150172666-150174554 (+)
LP/J MGP_LPJ_G0040165
 pseudogene Chr3:160888246-160891323 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0040068
 pseudogene Chr3:179148887-179149757 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0041015
 pseudogene Chr3:157493237-157494107 (+)
PWK/PhJ MGP_PWKPhJ_G0038717
 pseudogene Chr3:152742077-152742947 (+)
SPRET/EiJ MGP_SPRETEiJ_G0038421
 pseudogene Chr3:155687145-155688011 (+)
WSB/EiJ MGP_WSBEiJ_G0039265
 pseudogene Chr3:158483210-158484080 (+)



Homology
less
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000103295 Ensembl Gene Model | MGI Sequence Detail 871 C57BL/6J ±  kb
transcript ENSMUST00000193152 Ensembl | MGI Sequence Detail 499 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    Genomic 4
Other
Accession IDs
less
MGD-MRK-14328
References
more
  • Summaries
    All 6
  • Earliest
    J:3953 Seedorf U, et al., Cloning, expression and sequences of mouse sterol-carrier protein-x-encoding cDNAs and a related pseudogene. Gene. 1993 Jan 30;123(2):165-72
  • Latest
    J:34922 Raabe M, et al., Structure and chromosomal assignment of the murine sterol carrier protein 2 gene (Scp2) and two related pseudogenes by in situ hybridization. Cytogenet Cell Genet. 1996;73(4):279-81
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory