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Snrpe Gene Detail
Summary
  • Symbol
    Snrpe
  • Name
    small nuclear ribonucleoprotein E
  • Feature Type
    protein coding gene
  • IDs
    MGI:98346
    NCBI Gene: 20643
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:133531609-133538018 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 57.94 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    195 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_98346
 protein coding gene Chr1:133531609-133538029 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016488
 protein coding gene Chr1:137196497-137203124 (-)
A/J MGP_AJ_G0016471
 protein coding gene Chr1:132062178-132068549 (-)
AKR/J MGP_AKRJ_G0016436
 protein coding gene Chr1:135989235-135995610 (-)
BALB/cJ MGP_BALBcJ_G0016431
 protein coding gene Chr1:132395487-132401840 (-)
C3H/HeJ MGP_C3HHeJ_G0016257
 protein coding gene Chr1:136088223-136095448 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016892
 protein coding gene Chr1:142228183-142234547 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014603
 protein coding gene Chr1:125213405-125219765 (-)
CAST/EiJ MGP_CASTEiJ_G0015837
 protein coding gene Chr1:135128197-135135782 (-)
CBA/J MGP_CBAJ_G0016230
 protein coding gene Chr1:147117080-147123436 (-)
DBA/2J MGP_DBA2J_G0016336
 protein coding gene Chr1:131077453-131084077 (-)
FVB/NJ MGP_FVBNJ_G0016335
 protein coding gene Chr1:129697364-129703785 (-)
LP/J MGP_LPJ_G0016407
 protein coding gene Chr1:138481600-138488970 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016360
 protein coding gene Chr1:152865080-152871678 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016928
 protein coding gene Chr1:135707163-135713762 (-)
PWK/PhJ MGP_PWKPhJ_G0015623
 protein coding gene Chr1:130077919-130084387 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015410
 protein coding gene Chr1:134685224-134694630 (-)
WSB/EiJ MGP_WSBEiJ_G0015900
 protein coding gene Chr1:135732511-135740808 (-)



Homology
more
  • Human Ortholog
    SNRPE, small nuclear ribonucleoprotein polypeptide E
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SNRPE, small nuclear ribonucleoprotein polypeptide E
  • Synonyms
    HYPT11, Sm-E, SME, snRNP-E
  • Links
    NCBI Gene ID: 6635
    neXtProt AC: NX_P62304
    UniProt: P62304

  • Chr Location
    1q32.1; chr1:203861599-203871152 (+)  GRCh38
Human Diseases
more
  • Diseases
    4 with human SNRPE associations

Human Disease Mouse Models
      
IDs
IDs
IDs
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    1 images
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice heterozygous for an ENU-induced mutation display severely decreased testis weight and reduced spermatogenesis.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    45
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    760
  • Tissues
    53
  • cDNA Data
    82
  • Literature Summary
    3
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 20643 NCBI Gene Model | MGI Sequence Detail 6410 C57BL/6J ±  kb
    transcript NM_009227 RefSeq | MGI Sequence Detail 508 C57BL/6  
    polypeptide P62305 UniProt | EBI | MGI Sequence Detail 92 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 85
      Genomic 2
      cDNA 82
      Primer pair 1

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGD-MRK-14476, MGI:2138653, MGI:2139120
    References
    more
    • Summaries
      All 37
      Developmental Gene Expression 3
      Gene Ontology 6
      Phenotypes 7
    • Earliest
      J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
    • Latest
      J:179895 Weiss J, et al., ENU mutagenesis in mice identifies candidate genes for hypogonadism. Mamm Genome. 2012 Jun;23(5-6):346-55
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    12/10/2024
    MGI 6.24     		The Jackson Laboratory