Trbv24 Gene Detail

Summary

• Symbol
  Trbv24
• Name
  T cell receptor beta, variable 24
• Synonyms
  Tcrb-V17

• Feature Type
  gene segment
  BioType Conflict
  
• IDs
  MGI:98591
  NCBI Gene: 100124689
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr6:41195025-41195491 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 19.32 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  144 from dbSNP Build 142
• Strain Annotations
  18
• RFLP
  2

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_98591	gene segment	Chr6:41195025-41195491 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002632	pseudogenic gene segment	Chr6:39701093-39701559 (+)
A/J	MGP_AJ_G0002604	pseudogenic gene segment	Chr6:37971900-37972366 (+)
AKR/J	MGP_AKRJ_G0002589	pseudogenic gene segment	Chr6:39179469-39179935 (+)
BALB/cJ	MGP_BALBcJ_G0002592	pseudogenic gene segment	Chr6:38189940-38190406 (+)
C3H/HeJ	MGP_C3HHeJ_G0002555	pseudogenic gene segment	Chr6:39206130-39206596 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002735	pseudogenic gene segment	Chr6:40676838-40677304 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002285	pseudogenic gene segment	Chr6:35764290-35764731 (+)
CAST/EiJ	MGP_CASTEiJ_G0002531	pseudogenic gene segment	Chr6:39106870-39107336 (+)
CBA/J	MGP_CBAJ_G0002551	pseudogenic gene segment	Chr6:42342122-42342588 (+)
DBA/2J	MGP_DBA2J_G0002554	pseudogenic gene segment	Chr6:37784063-37784529 (+)
FVB/NJ	MGP_FVBNJ_G0002575	pseudogenic gene segment	Chr6:37537535-37538001 (+)
LP/J	MGP_LPJ_G0002634	pseudogenic gene segment	Chr6:39707300-39707766 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002564	pseudogenic gene segment	Chr6:44581689-44582155 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002745	pseudogenic gene segment	Chr6:39155738-39156204 (+)
PWK/PhJ	MGP_PWKPhJ_G0002488	pseudogenic gene segment	Chr6:37409744-37410210 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002440	pseudogenic gene segment	Chr6:38851964-38852433 (+)
WSB/EiJ	MGP_WSBEiJ_G0002559	pseudogenic gene segment	Chr6:39087013-39087479 (+)

Homology

• Gene Tree
  Trbv24
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000102955 (Evidence)
• NCBI Gene
  100124689

Representative Sequences			Length	Strain/Species
genomic	100124689	NCBI Gene Model | MGI Sequence Detail	467	C57BL/6J

Molecular
Reagents

• All nucleic 5

  Genomic 4

  Other 1

Other
Accession IDs

MGD-MRK-14883, MGD-MRK-14890, MGI:98598

References

• Summaries
  All 11
• Earliest
  J:8863 Chou HS, et al., Germline organization of the murine T cell receptor beta-chain genes. Science. 1987 Oct 23;238(4826):545-8
• Latest
  J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61

TSS for Trbv24:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr55861	Chr6:41195008-41195029 (+)	-6 bp