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Trbv12-3 Pseudogene Detail
Summary
  • Symbol
    Trbv12-3
  • Name
    T cell receptor beta, variable 12-3
  • Feature Type
    pseudogenic gene segment
  • IDs
    MGI:98603
    NCBI Gene: 100124676
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr6:41104526-41105010 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 19.21 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    166 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_98603
 pseudogenic gene segment Chr6:41104526-41105010 (+)
129S1/SvImJ MGP_129S1SvImJ_G0002629
 pseudogenic gene segment Chr6:39607282-39607766 (+)
A/J MGP_AJ_G0002601
 pseudogenic gene segment Chr6:37881774-37882258 (+)
AKR/J MGP_AKRJ_G0002586
 pseudogenic gene segment Chr6:39086870-39087354 (+)
BALB/cJ MGP_BALBcJ_G0002589
 pseudogenic gene segment Chr6:38093885-38094369 (+)
C3H/HeJ MGP_C3HHeJ_G0002552
 pseudogenic gene segment Chr6:39108245-39108729 (+)
C57BL/6NJ MGP_C57BL6NJ_G0002732
 pseudogenic gene segment Chr6:40592411-40592895 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0002282
 pseudogenic gene segment Chr6:35672373-35672851 (+)
CAST/EiJ MGP_CASTEiJ_G0002528
 pseudogenic gene segment Chr6:38997608-38998078 (+)
CBA/J MGP_CBAJ_G0002548
 pseudogenic gene segment Chr6:42230298-42230782 (+)
DBA/2J MGP_DBA2J_G0002551
 pseudogenic gene segment Chr6:37694404-37694888 (+)
FVB/NJ no annotation
LP/J MGP_LPJ_G0002631
 pseudogenic gene segment Chr6:39619091-39619575 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0002561
 pseudogenic gene segment Chr6:44477847-44478331 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0002742
 pseudogenic gene segment Chr6:39060206-39060690 (+)
PWK/PhJ MGP_PWKPhJ_G0002485
 pseudogenic gene segment Chr6:37320182-37320655 (+)
SPRET/EiJ MGP_SPRETEiJ_G0002437
 pseudogenic gene segment Chr6:38756756-38757236 (+)
WSB/EiJ MGP_WSBEiJ_G0002556
 pseudogenic gene segment Chr6:38991519-38991989 (+)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100124676 NCBI Gene Model | MGI Sequence Detail 485 C57BL/6J ±  kb
For the selected sequence
Molecular
Reagents
less
  • All nucleic 5
    Genomic 5
Other
Accession IDs
less
MGD-MRK-14895
References
more
  • Summaries
    All 7
  • Earliest
    J:8863 Chou HS, et al., Germline organization of the murine T cell receptor beta-chain genes. Science. 1987 Oct 23;238(4826):545-8
  • Latest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory