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Trgv2 Gene Detail
Summary
  • Symbol
    Trgv2
  • Name
    T cell receptor gamma variable 2
  • Synonyms
    Vgamma2
  • Feature Type
    gene segment
  • IDs
    MGI:98632
    NCBI Gene: 21636
  • Alliance
    gene page
  • Transcription Start Sites
    10 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:19520743-19521196 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 6.89 cM
Strain
Comparison
more
  • SNPs within 2kb
    170 from dbSNP Build 142
  • Strain Annotations
    12
  • RFLP
    2
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_98632
 gene segment Chr13:19520743-19521337 (-)
129S1/SvImJ MGP_129S1SvImJ_G0002515
 gene segment Chr13:16485321-16488195 (-)
A/J MGP_AJ_G0002487
 gene segment Chr13:16251351-16253829 (-)
AKR/J MGP_AKRJ_G0002474
 gene segment Chr13:16452782-16453378 (-)
BALB/cJ MGP_BALBcJ_G0002484
 gene segment Chr13:16261362-16266164 (-)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0002608
 gene segment Chr13:17144059-17144653 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002206
 gene segment Chr13:14618436-14619035 (+)
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0002471
 gene segment Chr13:15527592-15528186 (-)
LP/J MGP_LPJ_G0002512
 gene segment Chr13:16753604-16754188 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0002440
 gene segment Chr13:18160889-18161483 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0002604
 gene segment Chr13:16258837-16262162 (-)
PWK/PhJ MGP_PWKPhJ_G0002397
 gene segment Chr13:15906558-15907124 (+)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    TRGV10, T cell receptor gamma variable 10 (non-functional)
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TRGV10, T cell receptor gamma variable 10 (non-functional)
  • Synonyms
    TCRGV10, V3P
  • Links
    NCBI Gene ID: 6984
    UniProt: A0A0A0MS01

  • Chr Location
    7p14.1; chr7:38299810-38300322 (-)  GRCh38
  • Human Ortholog
    TRGV11, T cell receptor gamma variable 11 (non-functional)
  • Synonyms
    TCRGV11, V4P
  • Links
    NCBI Gene ID: 6985
    UniProt: A0A075B6L2

  • Chr Location
    7p14.1; chr7:38291616-38292078 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    12
  • Literature Summary
    2
Sequences &
Gene Models
less
  • All Sequences
    20
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 21636 NCBI Gene Model | MGI Sequence Detail 454 C57BL/6J ±  kb
transcript X00697 GenBank | ENA | DDBJ | MGI Sequence Detail 1286 Not Specified  
polypeptide A2J008 UniProt | EBI | MGI Sequence Detail 116 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
    IPR051117 T cell receptor gamma variable/constant region
Molecular
Reagents
less
  • All nucleic 33
    Genomic 4
    cDNA 28
    Other 1

    Microarray probesets 2
Other
Accession IDs
less
MGD-MRK-14924
References
more
  • Summaries
    All 29
    Developmental Gene Expression 2
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:7491 Saito H, et al., Complete primary structure of a heterodimeric T-cell receptor deduced from cDNA sequences. Nature. 1984 Jun 28-Jul 4;309(5971):757-62
  • Latest
    J:153581 Uche UN, et al., Recombination signal sequence-associated restriction on TCRdelta gene rearrangement affects the development of tissue-specific gammadelta T cells. J Immunol. 2009 Oct 15;183(8):4931-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory