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Tcte2 Gene Detail
Summary
  • Symbol
    Tcte2
  • Name
    t-complex-associated testis expressed 2
  • Synonyms
    Tcte-2
  • Feature Type
    lncRNA gene
  • IDs
    MGI:98641
    NCBI Gene: 21646
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:13936698-13981665 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 8.90 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1063 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_98641
 lncRNA gene Chr17:13932706-13982087 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023160
 protein coding gene Chr17:11224651-11523845 (-)
A/J no annotation
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0023128
 protein coding gene Chr17:10830602-11110649 (-)
C3H/HeJ MGP_C3HHeJ_G0022890
 protein coding gene Chr17:11320499-11369846 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023570
 protein coding gene Chr17:12001256-12053038 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021078
 protein coding gene Chr17:9181791-9432198 (-)
CAST/EiJ MGP_CASTEiJ_G0022405
 protein coding gene Chr17:11119579-11377471 (-)
CBA/J MGP_CBAJ_G0022863
 protein coding gene Chr17:12113622-12429537 (-)
DBA/2J no annotation
FVB/NJ no annotation
LP/J MGP_LPJ_G0023066
 protein coding gene Chr17:11112139-11458737 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022984
 protein coding gene Chr17:11383138-12080717 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023605
 protein coding gene Chr17:11192585-11422625 (-)
PWK/PhJ MGP_PWKPhJ_G0022151
 protein coding gene Chr17:10265265-10514835 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021982
 protein coding gene Chr17:10265837-10499112 (-)
WSB/EiJ MGP_WSBEiJ_G0022465
 protein coding gene Chr17:11465040-11777137 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    812
  • Tissues
    23
  • cDNA Data
    13
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 21646 NCBI Gene Model | MGI Sequence Detail 44968 C57BL/6J ±  kb
transcript NR_177953 RefSeq | MGI Sequence Detail 1490 ZRU/MplStud  
polypeptide Q9D821 UniProt | EBI | MGI Sequence Detail 120 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
Molecular
Reagents
less
  • All nucleic 16
    Genomic 1
    cDNA 14
    Other 1

    Microarray probesets 6
Other
Accession IDs
less
MGD-MRK-14944, MGD-MRK-14947, MGI:2146852
References
more
  • Summaries
    All 24
    Developmental Gene Expression 2
    Phenotypes 3
  • Earliest
    J:24009 Artzt K, et al., Mouse chromosome 17. Mamm Genome. 1991;1 Spec No:S280-300
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory