Tbp GO Annotations Graph

GO Annotations Graph

Symbol
Name
ID

Tbp
TATA box binding protein
MGI:101838

GO annotations (Text View) (Tabular View)

A table of the annotations represented in this image is provided below.

Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
Graph generated Fri Mar 10 20:53:16 2023.

Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP: Inferred from experiment
HMP: Inferred from high throughput mutant phenotype
HGI: Inferred from high throughput genetic interaction
HDA: Inferred from high throughput direct assay
HEP: Inferred from high throughput expression pattern
IDA: Inferred from direct assay
IEP: Inferred from expression pattern
IGI: Inferred from genetic interaction
IMP: Inferred from mutant phenotype
IPI: Inferred from physical interaction

Homology:

IAS: Inferred from ancestral sequence
IBA: Inferred from biological aspect of ancestor
IBD: Inferred from biological aspect of descendant
IKR: Inferred from key residues
IMR: Inferred from missing residues
IRD: Inferred from rapid divergence
ISA: Inferred from sequence alignment
ISM: Inferred from sequence model
ISO: Inferred from sequence orthology
ISS: Inferred from sequence or structural similarity

Automated:

IEA: Inferred from electronic annotation
RCA: Reviewed computational analysis

Other:

IC: Inferred by curator
NAS: Non-traceable author statement
ND: No biological data available
TAS: Traceable author statement

Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0017162	aryl hydrocarbon receptor binding	ISO	J:164563
Molecular Function	GO:0001046	core promoter sequence-specific DNA binding	ISO	J:164563
Molecular Function	GO:0003677	DNA binding	ISO	J:155856
Molecular Function	GO:0003677	DNA binding	IDA	J:138818
Molecular Function	GO:0003677	DNA binding	IDA	J:135225
Molecular Function	GO:0003677	DNA binding	IDA	J:95384
Molecular Function	GO:0140297	DNA-binding transcription factor binding	ISO	J:164563
Molecular Function	GO:0019899	enzyme binding	ISO	J:164563
Molecular Function	GO:0005515	protein binding	IPI	J:47012
Molecular Function	GO:0005515	protein binding	IPI	J:172915
Molecular Function	GO:0005515	protein binding	IPI	J:245730
Molecular Function	GO:0005515	protein binding	IPI	J:245730
Molecular Function	GO:0005515	protein binding	IPI	J:112691
Molecular Function	GO:0005515	protein binding	IPI	J:112691
Molecular Function	GO:0005515	protein binding	IPI	J:83344
Molecular Function	GO:0005515	protein binding	IPI	J:39012
Molecular Function	GO:0005515	protein binding	IPI	J:86566
Molecular Function	GO:0005515	protein binding	IPI	J:121371
Molecular Function	GO:0005515	protein binding	IPI	J:83344
Molecular Function	GO:0005515	protein binding	IPI	J:181994
Molecular Function	GO:0005515	protein binding	IPI	J:121371
Molecular Function	GO:0005515	protein binding	IPI	J:39012
Molecular Function	GO:0005515	protein binding	IPI	J:112691
Molecular Function	GO:0005515	protein binding	IPI	J:83344
Molecular Function	GO:0005515	protein binding	IPI	J:112691
Molecular Function	GO:0005515	protein binding	IPI	J:83344
Molecular Function	GO:0005515	protein binding	IPI	J:39012
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IDA	J:183633
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IDA	J:182882
Molecular Function	GO:0000979	RNA polymerase II core promoter sequence-specific DNA binding	ISO	J:164563
Molecular Function	GO:0016251	RNA polymerase II general transcription initiation factor activity	ISO	J:164563
Molecular Function	GO:0016251	RNA polymerase II general transcription initiation factor activity	ISO	J:155856
Molecular Function	GO:0016251	RNA polymerase II general transcription initiation factor activity	IBA	J:265628
Molecular Function	GO:0001091	RNA polymerase II general transcription initiation factor binding	ISO	J:164563
Molecular Function	GO:0061629	RNA polymerase II-specific DNA-binding transcription factor binding	IPI	J:146223
Molecular Function	GO:0000995	RNA polymerase III general transcription initiation factor activity	ISO	J:164563
Molecular Function	GO:0001093	TFIIB-class transcription factor binding	ISO	J:164563
Molecular Function	GO:0000976	transcription cis-regulatory region binding	ISO	J:73065
Cellular Component	GO:0000785	chromatin	ISO	J:164563
Cellular Component	GO:0005737	cytoplasm	IDA	J:83344
Cellular Component	GO:0000791	euchromatin	ISO	J:164563
Cellular Component	GO:0001674	female germ cell nucleus	IDA	J:123297
Cellular Component	GO:0001939	female pronucleus	IDA	J:123297
Cellular Component	GO:0001673	male germ cell nucleus	IDA	J:83344
Cellular Component	GO:0001940	male pronucleus	IDA	J:123297
Cellular Component	GO:0005654	nucleoplasm	ISO	J:164563
Cellular Component	GO:0005654	nucleoplasm	TAS	Reactome:R-MMU-5211233
Cellular Component	GO:0005654	nucleoplasm	TAS	Reactome:R-MMU-5211235
Cellular Component	GO:0005634	nucleus	ISO	J:164563
Cellular Component	GO:0005634	nucleus	ISO	J:155856
Cellular Component	GO:0005634	nucleus	IPI	J:181994
Cellular Component	GO:0005634	nucleus	IDA	J:121371
Cellular Component	GO:0005634	nucleus	IDA	J:112691
Cellular Component	GO:0005634	nucleus	IDA	J:183633
Cellular Component	GO:0005634	nucleus	IDA	J:74970
Cellular Component	GO:0005634	nucleus	IDA	J:79959
Cellular Component	GO:0005634	nucleus	IDA	J:123297
Cellular Component	GO:0005634	nucleus	IDA	J:99784
Cellular Component	GO:0005634	nucleus	IDA	J:181994
Cellular Component	GO:0005634	nucleus	IDA	J:123297
Cellular Component	GO:0005634	nucleus	IDA	J:81991
Cellular Component	GO:0005634	nucleus	IDA	J:138818
Cellular Component	GO:0045120	pronucleus	IDA	J:113226
Cellular Component	GO:0032991	protein-containing complex	ISO	J:164563
Cellular Component	GO:0000120	RNA polymerase I transcription regulator complex	TAS	J:39012
Cellular Component	GO:0005668	RNA polymerase transcription factor SL1 complex	IPI	J:245730
Cellular Component	GO:0005668	RNA polymerase transcription factor SL1 complex	IPI	J:245730
Cellular Component	GO:0005672	transcription factor TFIIA complex	ISO	J:164563
Cellular Component	GO:0005669	transcription factor TFIID complex	ISO	J:155856
Cellular Component	GO:0005669	transcription factor TFIID complex	ISO	J:164563
Cellular Component	GO:0005669	transcription factor TFIID complex	IDA	J:245730
Cellular Component	GO:0005669	transcription factor TFIID complex	ISO	J:86236
Biological Process	GO:0006352	DNA-templated transcription initiation	IBA	J:265628
Biological Process	GO:0042789	mRNA transcription by RNA polymerase II	ISO	J:164563
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	ISO	J:155856
Biological Process	GO:0060261	positive regulation of transcription initiation by RNA polymerase II	ISO	J:164563
Biological Process	GO:0006468	protein phosphorylation	ISO	J:164563
Biological Process	GO:0051123	RNA polymerase II preinitiation complex assembly	ISO	J:164563
Biological Process	GO:0006366	transcription by RNA polymerase II	ISO	J:164563
Biological Process	GO:0006366	transcription by RNA polymerase II	IMP	J:79959
Biological Process	GO:0006383	transcription by RNA polymerase III	IMP	J:79959
Biological Process	GO:0006383	transcription by RNA polymerase III	ISO	J:73065

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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